20  Tools

Important

🚧 This page is still under construction 🚧

This page all the software with links used and referred to in the practical chapters of the book.

20.1 Introduction to R and the Tidyverse

20.2 Introduction to Python and Pandas

20.3 Introduction to Git(Hub)

  • git (normally installed by default on all UNIX based operating systems e.g. Linux, OSX)

20.4 Functional Profiling

20.5 De novo assembly

20.6 Genome Mapping

20.7 Phylogenomics

20.8 Ancient Metagenomic Pipelines