Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-15 20:20:44

@Maria Lopopolo has joined the channel

Gunnar Neumann (gunnar_neumann@eva.mpg.de)
2022-11-15 20:21:48

@Gunnar Neumann has joined the channel

aidanva (aida.andrades@gmail.com)
2022-11-15 20:21:48

@aidanva has joined the channel

Ian Light (light@mpiib-berlin.mpg.de)
2022-11-15 20:21:48

@Ian Light has joined the channel

Shreya (shreya23@uchicago.edu)
2022-11-15 20:21:48

@Shreya has joined the channel

Kadir Toykan Özdoğan (k.t.ozdogan@uu.nl)
2022-11-15 20:21:48

@Kadir Toykan Özdoğan has joined the channel

Betsy Nelson (nelson@shh.mpg.de)
2022-11-15 20:21:48

@Betsy Nelson has joined the channel

Miriam Bravo (bravolomiriam@gmail.com)
2022-11-15 20:21:48

@Miriam Bravo has joined the channel

Shreya (shreya23@uchicago.edu)
2022-11-15 20:22:49

SPAAMtisch!!! can we get a reminder what the pun means from the German speakers please 😄

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-15 21:30:46

*Thread Reply:* Google says: A Stammtisch (German for “regulars’ table”, [ˈʃtamtɪʃ]) is an informal group meeting held on a regular basis, and also the usually large, often round table around which the group meets. A Stammtisch is not a structured meeting, but rather a friendly get-together.

👌 Zoé Pochon
Polly
2022-11-15 21:48:43

@Maria Lopopolo has a polly for you!

Polly
2022-11-15 21:57:03

@Maria Lopopolo has a polly for you!

Audrey Lin (linat@si.edu)
2022-11-15 22:11:31

@Audrey Lin has joined the channel

Ivany Argueta (ivanyjocelyne.arguetamejia.6320@student.uu.se)
2022-11-15 22:34:14

@Ivany Argueta has joined the channel

Alina Hiss (alina_naomi_hiss@eva.mpg.de)
2022-11-15 22:36:06

@Alina Hiss has joined the channel

Barbara (bbmoguel@gmail.com)
2022-11-15 23:13:37

@Barbara has joined the channel

Louis Lhote (louis.lhote@outlook.fr)
2022-11-15 23:22:46

@Louis Lhote has joined the channel

Sterling Wright (sterlingwright2016@utexas.edu)
2022-11-16 00:26:20

@Sterling Wright has joined the channel

Cameron Pauly (cjpauly3@gmail.com)
2022-11-16 00:40:17

@Cameron Pauly has joined the channel

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2022-11-16 01:01:18

@Biancamaria Bonucci has joined the channel

Zoé Pochon (zoe.pochon@gmail.com)
2022-11-16 09:44:48

@Zoé Pochon has joined the channel

irinavelsko (irinavelsko@gmail.com)
2022-11-16 09:45:02

@irinavelsko has joined the channel

Gabriel Yaxal Ponce Soto (yaxal@iecologia.unam.mx)
2022-11-16 10:05:29

@Gabriel Yaxal Ponce Soto has joined the channel

Anna White (annawhite@palaeome.org)
2022-11-16 11:22:20

@Anna White has joined the channel

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-22 09:53:41

Dear @channel looks like most of you have expressed their preference on date and topic for our first spaamtisch. As for the date we have the 1st of December (time should be at 5pm CET) and the topic chosen was “What SPAAMTisch should be for you”. Link to come soon 🙂

🙌 Biancamaria Bonucci, Julien Fumey, aidanva, Alina Hiss
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-22 09:55:59

*Thread Reply:* You don't want to do it on gather.town?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-23 11:11:59

*Thread Reply:* Yes I think that will be probably the case ;)

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-23 13:07:46

*Thread Reply:* 👍

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-30 11:59:47

Hello @channel this is a reminder that tomorrow is the first spaamtisch meeting 🙂 we will meet at 5pm CET on gather.town (link below) to discuss what should be spaamtisch for you! See you soon! https://gather.town/app/PlXjb0deog0B4JCq/spaam-community

app.gather.town
:poop_party: James Fellows Yates
:catjam: Anna White
:partyparrot: aidanva, Cameron Pauly, Miriam Bravo
:party_dino: Miriam Bravo
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-30 12:01:59

*Thread Reply:* @Maria Lopopolo it woul dbe good to post on #general what SPAAMtisch is as well as this, just to remind people who may have missed htis in the past 🙂

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-30 12:02:09

*Thread Reply:* It's ok to @ channel on there too;)

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-30 12:02:44

*Thread Reply:* yep about to do that too 😉

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-30 12:03:19

*Thread Reply:* got the power

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-11-30 12:03:21

*Thread Reply:* you've**

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-30 12:14:09

*Thread Reply:* :catjam:

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-11-30 12:15:04

*Thread Reply:* 308 people now --> 🤌

🤌 James Fellows Yates, Gunnar Neumann
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-12-01 06:46:26

*Thread Reply:* You should also post on the mailing list and Twitter! Completely forgot about those

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-12-01 16:56:03

:spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance: :spamdance:

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-01 17:00:32

We are on guys!!!! Join us!!

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-12-01 17:15:51

Follow hte purple arrows 🙂

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-12-01 17:16:11

And click on your name in the bottom left to if you get lost and need to 'respawn' 🙂

😅 Alina Hiss
Zoé Pochon (zoe.pochon@gmail.com)
2022-12-01 17:20:54

The university internet is very shaky right now, I got kicked out twice. I'll have to try next time 😐

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-01 20:49:19

Hello @channel below are my raw notes from our first SPAAMTisch meeting. Briefly, we discussed the format, the inclusion in the blog, and the participation of PIs (read and comment if you like). There will be polls to come for you to check your availability for the next meeting, choose the topic, and know your opinion on PI participation. Watch this space! Ta-ta! https://docs.google.com/document/d/1YIaMrZV-DxZ_-aY0viloO3VwmErzyzgF/edit?usp=sharing&ouid=118094628411852884592&rtpof=true&sd=true

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2022-12-02 08:41:25

*Thread Reply:* Nice notes 😎

:partyparrot: Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-01 20:53:00

@channel Here is the rota of topics that we will use to do the polls! Please add new topics or cross-out discussed ones! https://docs.google.com/document/d/1YMcDb5sJMAZeThgKkNea7X5V7pa1eaQx/edit?usp=sharing&ouid=118094628411852884592&rtpof=true&sd=true

Polly
2022-12-05 14:17:23

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-05 14:18:43

Hi @channel find above 👆 the poll to check who of you will be available on the 12th of January 2023 at 5pm CET for our second #spaamtisch meeting

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-12 11:55:20

Hello @channel today it’s the last day to decide the date. Looks like most of you are available on the 12th of January 2023. To follow, I will post another poll about the topic to discuss 🙂 watch this space!

Polly
2022-12-15 13:02:53

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-15 13:06:24

Hey @channel so now that we have decided the date of the next meeting (12th of Jan 2023 at 5 pm CET) please express your preference on the topic from the poll above 🙂 You can also add an option if you are unhappy with the ones included in the list. Cheers!

Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2022-12-15 14:04:45

*Thread Reply:* Only one selection possible? Or should we make more than 1 topics?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-15 14:23:52

*Thread Reply:* I am not sure we would have the time to discuss two topics since we have only one hour . As of now let’s try with one topic and see how it goes 🙂 going forward we can see how much time we spend on one topic and see if we can discuss more than one 🙂

irinavelsko (irinavelsko@gmail.com)
2022-12-15 14:25:51

*Thread Reply:* Can we vote for more than 1 option?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-15 15:01:25

*Thread Reply:* you can vote for multiple options but we might not be able to discuss more than one topic in one meeting. I guess we have to test it.

👍 irinavelsko
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2022-12-19 10:32:30

@channel 👆 don’t forget to vote for the topic before the holidays 🙂. So far mSourceTracker is in pole position followed by phylogenetic trees:partyparrot:

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-06 11:47:04

Hello @channel hope you had a nice holiday time 🙂 this is just to confirm that next week the 12th of Jan from 5 -6 pm CET we will discuss source tracking methods and if we have some times phylogenetic trees! See you all next week!

👍 James Fellows Yates, Gunnar Neumann, Sarah Johnson, Jasmin Frangenberg
👍:skin_tone_6: Miriam Bravo
🤩 Maria Zicos
Toni de Dios Martínez (tonidedios94@gmail.com)
2023-01-09 10:07:42

@Toni de Dios Martínez has joined the channel

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-12 11:35:32

Hello @channel see you later in gather.town at the link pinned to this channel (5 - 6 pm CET) 🙂

👍 Jasmin Frangenberg, Biancamaria Bonucci, Anna White
👍:skin_tone_4: Anan Ibrahim
👍:skin_tone_6: Miriam Bravo
Zoé Pochon (zoe.pochon@gmail.com)
2023-01-12 16:29:14

I've been dealing with shaky wifi again the whole day so I'll have to pass, sorry. Swiss countryside is a bit slow in that regard. But I'm not giving up ✊😅. Have fun!

👍 Maria Lopopolo
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-01-12 16:52:18

@aidanva and I can't make it today (or rather got confused what day it was today because we were traveling yesterday 😅 and have to go get food)

👍 Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-12 16:55:08

I am connecting now 🙂

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-12 16:59:22

we are in the room we left last time so when you enter just go up from the main hall 🙂

Gunnar Neumann (gunnar_neumann@eva.mpg.de)
2023-01-12 16:59:47

will be a few min late…

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-12 17:01:57

some of us are connected we’ll start in few minutes 😉

Sarah Johnson (sarahjjohnson@ou.edu)
2023-01-12 17:08:36

I’ve joined but have never used gather before so it might take me a while to get my bearings

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-01-12 17:09:11

*Thread Reply:* (fast method: click on Maria's name in the participant list and press 'follow'

🙏 Maria Lopopolo
Sarah Johnson (sarahjjohnson@ou.edu)
2023-01-12 17:10:23

*Thread Reply:* Thank you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-12 19:07:15

Hey @channel I updated the notes for the second meeting. But mine can be lacking some parts of the conversation so if you took some on your own pls add them (maybe @Abby Gancz?) https://docs.google.com/document/d/1YIaMrZV-DxZ_-aY0viloO3VwmErzyzgF/edit?usp=sharing&ouid=118094628411852884592&rtpof=true&sd=true Cheers! See you next month!

🙌:skin_tone_6: Miriam Bravo
🙌 Biancamaria Bonucci, Anna White, Jasmin Frangenberg, Camila Duitama
Polly
2023-01-17 11:37:02

This polly is closed. @Maria Lopopolo has a polly for you!

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-01-17 11:53:00

*Thread Reply:* @Maria Lopopolo do you think you could make a reeccuring google event (if you use it?)

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-01-17 11:53:09

*Thread Reply:* Otherwise I worry I'll forget 😬

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-17 14:14:56

*Thread Reply:* Maybe I can do it later on when I see that most of people seem to be free around always the same time 😉 for now I’d like to keep it flexible. But maybe I can do a google event even if not recurring? right?

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-01-17 14:43:47

*Thread Reply:* Yes I think you can modify the type of event it is after

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-01-17 11:44:32

Hello @channel I hope you were pleased with the first meeting we had last week. Please let me know from the poll above if the 16th of Feb at 5 -6 pm CET is ok for you for the next one 🙂 Thanks! Also four things: • Please don’t forget to populate the document for the rota of topics with your proposals (pinned) • In Feb we’ll likely further discuss phylogenetic trees with another lighter topic • Have a look at the notes docs from the previous meeting to have an idea of the questions asked (pinned) • In March we’ll change format and I’ll invite an author to present their recent work (watch this space to know more :mask_parrot:)

:catjam: Anna White, James Fellows Yates, Jasmin Frangenberg, Biancamaria Bonucci, Nora Bergfeldt
Polly
2023-02-02 19:00:51

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-02 19:05:24

Hello @channel the time of the meeting is approaching (16th of Feb 2023 5-6pm CET) so please express your preference on the discussion topic and please N.B. you can add an option in the poll (e.g. if you would like something more introductory to be discussed on some particular topic). Also, don’t forget we’ll have a guest speaker in March :partyparrot:

👍 Jasmin Frangenberg, Biancamaria Bonucci
Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-02-02 19:12:22

*Thread Reply:* What does option 5 mean exactly?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-02 19:16:26

*Thread Reply:* Dealing with challenges associated with this work….it’s more like issues discussion in general related to PhD or postdocs (e.g. lots of things don’t lead to enough data to draw conclusions, etc)

👍 Jasmin Frangenberg
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-10 16:14:07

Hello @channel , the people have chosen 🙂 For the #spaamtisch meeting of the 16th of Feb (5-6pm CET) we will discuss: • Phylogenetics tree • Decontamination/ authentication of aDNA See you next week!

🙌 Ophélie Lebrasseur, Camila Duitama, James Fellows Yates, Sterling Wright, aidanva, Biancamaria Bonucci, Ian Light, Zoé Pochon, s.wasef, Arve Lee
🙌:skin_tone_6: Miriam Bravo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-16 16:49:20

Hello @channel see you in 10 min at the usual gathertown link pinned in this channel. https://gather.town/app/PlXjb0deog0B4JCq/spaam-community

app.gather.town
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-16 16:57:11

Ok so if you right click on my name in the chat of gathertown you can press the “follow” option to arrive in the same room as me

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-16 16:59:37

follow Yaxal 😄

✅ Arve Lee
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-02-17 05:09:03
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-02-17 05:09:42

Apparently it doesn't mean it'll stop working if more people join, rather they won't guarantee sufficient connection. So might be worth having a backup system

🙀 Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-17 19:01:48

Hello @channel I updated the notes (document pinned in channel). Please have a look and add/correct stuff if you feel it’s necessary.

Polly
2023-02-17 19:06:34

@Maria Lopopolo has a polly for you! Votes in this polly are anonymous 🔒.

Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-02-20 12:41:05

*Thread Reply:* Option 5. register = record?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-20 15:28:20

*Thread Reply:* yes sorry! I misspelled that

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-17 19:11:19

Hello @channel as a result of the discussion from the last #spaamtisch meeting I am posting here a poll. With this poll I leave to the community the decision on the PI participation to the next meeting. The next meeting will be with a slightly different format. I will invite an author to talk about their recent work. So stay tuned and pls vote🙂

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-17 19:16:53

ps. I made the polly anonymous so you don’t feel shy to vote what you feel 🙂 I hope it’s ok.

Benjamin Vernot (benjamin_vernot@eva.mpg.de)
2023-02-18 08:20:45

Are PIs allowed to vote in the poll? 🙂

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-20 11:13:31

hmmm good question…ideally anyone that is interested in following the content of the channel can. If they happen to be PIs then can vote keeping in mind the students perspective I guess 🙂

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-02-27 17:46:14

Hello @channel as anticipated in previous sessions of #spaamtisch our next two meetings will be in different formats. I have invited two authors presenting their published or nearly published recent research work. For our first #spaamtisch of this format we’ll have @Camila Duitama presenting on the 21st of March at 5-6pm CET. Camila will present her work on:

decOM: Similarity-based microbial source tracking of ancient oral samples using k-mer-based methods https://www.biorxiv.org/content/10.1101/2023.01.26.525439v1.full

Please be aware that everybody is invited to participate at this meeting. However, as per community vote earlier this month, PIs will be allowed to ask one question in order to give the opportunity to young researchers and students to be more involved. So read up and prepare your questions! 🙂

bioRxiv
:mask_parrot: Camila Duitama, James Fellows Yates, Biancamaria Bonucci, Alina Hiss, Kadir Toykan Özdoğan, Anan Ibrahim, Arve Lee
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-03-21 12:53:03

Hello @channel don’t forget our meeting today at 5-6:30pm CET with @Camila Duitama presenting her PhD work on ancient metagenomics decontamination.

Find below the link to the Teams meeting. You do not need a Teams account or app installed on your device if you just choose the option “Join from web” on Google Chrome as your web browser. See you later!!!

Microsoft Teams meeting Join on your computer, mobile app or room device MDE3MTkxOGEtMGYwOS00MjgwLTkyNzQtMjQzODhlNWY2NjM2%40thread.v2/0?context=%7b%22Tid%22%3a%22096815dc-d9eb-4bc3-a5a3-53c77e7d34e2%22%2c%22Oid%22%3a%22025f379f-ad5e-4292-8dac-c298cc0da277%22%7d|Click here to join the meeting> Meeting ID: 354 965 390 137 Passcode: gLYWwt Download Teams | Join on the web Learn More | meeting_MDE3MTkxOGEtMGYwOS00MjgwLTkyNzQtMjQzODhlNWY2NjM2@thread.v2&messageId=0&language=en-US|Meeting options>

Microsoft Teams
microsoft.com
microsoft.com
support.microsoft.com
👍 Camila Duitama, Liam Lanigan
👍:skin_tone_4: Anan Ibrahim
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-03-21 17:01:05

@channel we are online now 🙂 👆 in few minutes Camila will start presenting

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-03-21 17:07:30

*Thread Reply:*

❤️ Camila Duitama, Maria Lopopolo
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-03-21 17:12:30

*Thread Reply:* On the big screen

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-03-24 15:34:54

Dear @channel I am planning to upload the recording of Camila’s spaamtisch seminar on the youtube channel. I just want to check that you are all good giving me consent. Particularly the people who asked the questions @Darjan Gande @Anna White @Maria Zicos @irinavelsko @Sterling Wright? It would be nice to have the Q&A section too 🙂

👍 Maria Zicos
irinavelsko (irinavelsko@gmail.com)
2023-03-24 16:01:59

*Thread Reply:* Fine for me!

Sterling Wright (sterlingwright2016@utexas.edu)
2023-03-24 16:04:22

*Thread Reply:* Fine with me too!

Darjan Gande (dgande@marum.de)
2023-03-24 16:05:18

*Thread Reply:* fine with me as well.

Anna White (annawhite@palaeome.org)
2023-03-24 16:30:44

*Thread Reply:* No problem 🙂

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-03-29 12:57:10

*Thread Reply:* Thank you!!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-04-13 14:09:58

Dear @channel save the date! As anticipated our next #spaamtisch meeting will be in seminar format and it will be done on the 18th of April 2023 at 5-6 pm CET via Teams. Our next speaker will be @Andrea quagliariello who will present his recent work on ancient oral microbiome. Hopefully see you all there! https://www.nature.com/articles/s41467-022-34416-0

Nature
💀 Liam Lanigan, Miriam Bravo
:mask_parrot: James Fellows Yates, Camila Duitama
Andrea quagliariello (quagliariello.andrea@gmail.com)
2023-04-13 18:49:29

@Andrea quagliariello has joined the channel

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-04-17 14:41:27

Dear @channel don’t forget tomorrow the 18th at 5-6pm CET our second seminar for SPAAMtisch where @Andrea quagliariello will present their recent work!

Find below the link to the Teams meeting. You do not need a Teams account or app installed on your device if you just choose the option “Join from web” on Google Chrome as your web browser. See you tomorrow!!! Microsoft Teams meeting Join on your computer, mobile app or room device MTMyYmZmZjEtMjFhNC00YWRmLWI0NGItZmIxNGY3YjkyNWY4%40thread.v2/0?context=%7b%22Tid%22%3a%22096815dc-d9eb-4bc3-a5a3-53c77e7d34e2%22%2c%22Oid%22%3a%22025f379f-ad5e-4292-8dac-c298cc0da277%22%7d|Click here to join the meeting> Meeting ID: 347 420 873 133 Passcode: cL8i53 Download Teams | Join on the web Learn more | meeting_MTMyYmZmZjEtMjFhNC00YWRmLWI0NGItZmIxNGY3YjkyNWY4@thread.v2&messageId=0&language=en-GB|Meeting options>

Microsoft Teams
microsoft.com
microsoft.com
support.microsoft.com
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-04-18 14:24:09

Dear @channel don’t forget our seminar today 👆 at 5-6pm CET.

:partyparrot: James Fellows Yates
Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-04-18 14:25:03

*Thread Reply:* Will you record the presi? 🥺

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-04-18 14:26:09

*Thread Reply:* Yep I will 🙂

:all_the_things: Jasmin Frangenberg
Miriam Bravo (bravolomiriam@gmail.com)
2023-04-18 18:04:17

@Andrea quagliariello will be participating in this event in June!

👍 James Fellows Yates, Maria Lopopolo, aidanva, Biancamaria Bonucci, Yuejiao Huang
Wenqin Yu (1132895879@qq.com)
2023-04-19 05:35:08

*Thread Reply:* If it is possible this event allows to participate online?👀

Polly
2023-05-02 17:51:37

@Maria Lopopolo has a polly for you!

Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-05-02 18:13:27

*Thread Reply:* Could only do earlier that day or on another date.

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-05-02 18:00:09

Hello @channel please find above a proposed date for the next #spaamtisch meeting. For this month the format of the meeting will be the “regular’s table”. Soon, we will post a poll for the topics to choose or propose for the open discussion. Do not forget to fill out the pinned document “rota of topics” if you have any idea to propose. Cheers!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-05-03 17:25:03

Hi @channel since many of you seem busy on the 24th, I added another option in the date poll.

Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-05-03 17:26:13

*Thread Reply:* Vacation start 🙈 Nevermind me

Cameron Pauly (cjpauly3@gmail.com)
2023-05-03 19:15:52

*Thread Reply:* There doesn't seem to be a way to say that both dates are OK

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-05-03 20:04:12

*Thread Reply:* I allowed multiple choice now 😉

Polly
2023-05-08 19:03:01

@Biancamaria Bonucci has a polly for you!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-08 19:07:22

Hello @channel ! Find here the poll to choose our next #spaamtisch meeting! You can also add new topics ☺️

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-10 15:46:15

Hello @channel , people have chosen 🙂 Our next #spaamtisch meeting is going to be on the 25th of May, 5-6 pm CET !!

Also, don’t forget to vote for the topic you would like to discuss! We will send the results at the end of the week 🙂

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-15 16:27:10

Hello @channel! People have chosen!! In our next #spaamtisch we will speak about : • Functional analyses on pathogens or microbial communities • If we have time: Taxonomic classifiers: e.g. KrakenUniq (can be others too) We will send a reminder closer to the date! Hope to see you there! :catjam:

:partyparrot: Maria Lopopolo, aidanva
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-25 14:13:37

Hello @channel don’t forget our #spaamtisch meeting today at 5-6 pm CET! We will discuss together about:

  1. Functional analyses on pathogens or microbial communities
  2. If we have time: Taxonomic classifiers! We will gather in gather.town (see link below) See you super soon!! ☺️ ☺️

https://gather.town/app/PlXjb0deog0B4JCq/spaam-community

app.gather.town
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-25 17:02:18

@channel come to the ’room on the right where there is the table!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-25 17:04:02

@channel We are starting!

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-05-25 17:58:10

Fyi

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-05-25 17:58:18

If you didn't see already

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-05-25 17:58:29

I guess we should just use zoom/teams in the future

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-25 18:02:42

Oh no! I just saw it. I can setup a zoom for next times ! Thanks James😊

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-05-25 18:05:04

And thank you to who attended for the nice discussion!!! :catjam:

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-05-30 18:52:54

Weren't Camila and Andrea's talks on the SPAAM YouTube channel? I can't find them 🤔

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-07 15:23:30

Dear @channel as promised we have published the two seminars (@Camila Duitama here and @Andrea quagliariello here )from our previous SPAAMTisch meetings on our community youtube channel! Do catch up with these amazing seminars if you were not able to follow the live meetings!

👍 Liam Lanigan, Biancamaria Bonucci, Julien Fumey, Sterling Wright, Gunnar Neumann, Laura Carrillo Olivas
:mask_parrot: James Fellows Yates, aidanva, Camila Duitama, Jasmin Frangenberg
Polly
2023-06-08 11:36:52

This polly is closed. @Maria Lopopolo has a polly for you!

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-06-12 12:23:39

*Thread Reply:* Oops, I can't do the 27th at 5, have a GCS meeting then

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-08 11:40:22

Dear @channel please note the poll above for choosing the next #spaamtisch seminar day 👆. In the next seminar series our very own @Maxime Borry and @James Fellows Yates will present AMDirT to the community!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-14 10:31:11

@channel reminder to vote for the day / time for the next #spaamtisch meeting !

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-16 19:03:31

Hello @channel according to vote and availability of the speakers, the selected date for the next #spaamtisch meeting will be on the 26th of June at 4-5pm CET. One hour before our usual time. The meeting will be a seminar format where @Maxime Borry and @James Fellows Yates will present our community paper on AMDirT! See you soon! Link to Zoom will be sent closer to the date. Cheers!

🙌 Jasmin Frangenberg, Camila Duitama
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-06-22 12:04:38

Dear @channel don’t forget on the 26th of June at 4-5pm CET our seminar for SPAAMtisch where @Maxime Borry and @James Fellows Yates will present the community paper on AMDirT! See you soon!☺️ Find below the link to the Zoom meeting.

Biancamaria Bonucci is inviting you to a scheduled Zoom meeting.

Topic: SPAAMtisch meeting Time: Jun 26, 2023 04:00 PM Amsterdam, Berlin, Rome, Stockholm, Vienna

Join Zoom Meeting https://ut-ee.zoom.us/j/98167778236?pwd=SW9wMzVUY1I2ZXRFclN5bmJRSm9tZz09

Meeting ID: 981 6777 8236 Passcode: spaam

James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-06-26 06:42:48

People based in Leipzig - I was just informed that SPAAMTisch was today rather than the tomorrow my brain was telling me it was on (thanks @aidanva 😬).

I'll stay at the institute to present my bit, so if other people will still be in the institute at the time maybe we could sit in a room together? If so, please react with :face_palm: to this message to know numbers

(@Maxime Borry @aidanva @Alina Hiss @Alex Hübner @irinavelsko @Kadir Toykan Özdoğan @Christina Warinner )

🙌 Kadir Toykan Özdoğan
:face_palm: Alina Hiss, Gunnar Neumann
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-06-26 12:35:44

*Thread Reply:* @Kadir Toykan Özdoğan @Alina Hiss @Gunnar Neumann @Maxime Borry I've reserved the terrarium 🙂

👍 Maxime Borry
🦎 Gunnar Neumann
:party_dino: Alina Hiss
irinavelsko (irinavelsko@gmail.com)
2023-06-26 12:36:19

*Thread Reply:* @Keri Burge and I will also join

:mask_parrot: James Fellows Yates
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-06-26 12:03:17

Hey @channel , as James said, today at 4-5pm CET there is going to be the seminar where @Maxime Borry and @James Fellows Yates will present the community paper on AMDirT!

See you super soon!☺️ Find below the link to the Zoom meeting.

Biancamaria Bonucci is inviting you to a scheduled Zoom meeting.

Topic: SPAAMtisch meeting Time: Jun 26, 2023 04:00 PM Amsterdam, Berlin, Rome, Stockholm, Vienna

Join Zoom Meeting https://ut-ee.zoom.us/j/98167778236?pwd=SW9wMzVUY1I2ZXRFclN5bmJRSm9tZz09

Meeting ID: 981 6777 8236 Passcode: spaam

:spaam: James Fellows Yates
:mask_parrot: James Fellows Yates
:spaamtisch: James Fellows Yates, Jasmin Frangenberg, Miriam Bravo
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2023-06-26 16:06:11

*Thread Reply:* Has the recording started?

Keri Burge (keri.burge@gmail.com)
2023-06-26 12:37:05

@Keri Burge has joined the channel

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-26 15:55:36

@channel 5 mins to go to listen to @James Fellows Yates and @Maxime Borry!

Polly
2023-06-29 14:51:08

@Maria Lopopolo has a polly for you!

Jasmin Frangenberg (jasmin.frangenberg@hki-jena.de)
2023-06-29 14:57:47

*Thread Reply:* Middle week of August (that month has 5 weeks this year 😅)

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-29 14:53:04

Dear @channel above, a survey just to see when ppl will be around in summer :)

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-06-29 15:04:52

(you can give more than one vote now)

Miriam Bravo (bravolomiriam@gmail.com)
2023-07-03 11:51:53

🚨Hello @channel 🚨 📣Check out the FIRST SPAAM :spaam: NEWSLETTER!! 📣 :headbangingparrot: We will post the next one in three months! :spaam::catjam::awwyeah:

🫀 Ania TSL
Polly
2023-07-05 12:27:15

@Maria Lopopolo has a polly for you!

Polly
2023-07-05 12:29:30

@Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-07-05 12:36:51

Dear @channel summer is here! July spaamtisch session will be our cosy “regular’s table” format :spaamtisch: Please reply to the two polls above for the date and the topics you would like to discuss.

Also please don’t forget to populate our “rota of topic” document pinned in the #spaamtisch channel so that you get the chance to discuss your topic of interest too!

Spaamtisch will likely take a break in August due to summer holidays. However, we will most likely send out a survey for you to fill out so that we can get your opinions into consideration to make spaamtisch more useful for everyone for the next academic year :spaamtisch: Cheerio!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-07-07 15:02:17

Hey @channel!! The people have spoken 🎺 For our July #spaamtisch we will meet on the 11th at 5-6 pm CET. The topics we will have a discussion about are : • Metagenomics assembly • SNP evaluation The zoom link will follow in the next days!:spaamtisch::spaamtisch: See you there!!

:partyparrot: Kadir Toykan Özdoğan, Nikolay Oskolkov, Gabriel Yaxal Ponce Soto, aidanva, Mohamed Sarhan
:spaamtisch: Maria Lopopolo, Miriam Bravo
😯 Miriam Bravo
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-07-10 15:23:15

Hey @channel, here the link for our #spaamtisch meeting! We’ll meet tomorrow, 11th of July, 5-6 PM CET! See you there! :spaamtisch:

Biancamaria Bonucci is inviting you to a scheduled Zoom meeting.

Topic: #SPAAMtisch Time: This is a recurring meeting Meet anytime

Join Zoom Meeting https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

Meeting ID: 935 7705 2785 Passcode: spaam

:spaamtisch: Alina Hiss
:spaam: Alina Hiss
Laura Carrillo Olivas (laura-carrillo-olivas@hotmail.com)
2023-07-11 17:04:32

Hi @channel see you in our meeting in this link! https://us04web.zoom.us/j/71636229018?pwd=Bae3lg2nfHOdbWSUVOC197HaL0nLlI.1

Laura Carrillo Olivas (laura-carrillo-olivas@hotmail.com)
2023-07-11 17:05:48

Sorry, the first one is working!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-08-08 17:04:26

Dear @channel , as promised, we prepared a survey for you to fill out, so that we can collect feedbacks and opinions on #spaamtisch! We ask you to answer by the 31st of August. We can’t wait to see your feedbacks, in order to make the event a better experience for everyone!! Cheers :spaamtisch::spaamtisch:

https://forms.gle/hqJkAkgP3duyRZAd9

Google Docs
💃 Maria Lopopolo
🍻 Gunnar Neumann, Wenqin Yu
:spaamtisch: Miriam Bravo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-09-08 16:50:29

Hello @channel could I ask you to give some more feedback on the #spaamtisch event? We received only 9 responses ( and two people got confused with the summer school ehehe). I remind you this so that with your feedback we can improve this initiative. Thanks a lot!

:spaamtisch: Biancamaria Bonucci, Laura Carrillo Olivas, Nikolay Oskolkov, Wenqin Yu
👍 Maria Zicos, Nikolay Oskolkov
Polly
2023-09-14 13:57:46

@Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-09-14 13:58:59

@channel 👆 for tomorrow!!!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-10-16 10:39:38

Hello @channel I hope your summer/conference break was nice! It's Spooky Season and what better way to scare away our metagenomics ghosts if not with a spaamtish séance???? Our first meeting will be in the "regular's table" format. We'll socialise and discuss the future of spaamtisch. But fear not we'll also have a topic to discuss that you'll choose.

Feel free to take out your best witch/warlock hat for the occasion:female_mage:

Please choose a date and time that suits you best from the poll below :)

Cheers! The spaamtisch organisers

🪄 Aleksandra Laura Pach, Biancamaria Bonucci, Wenqin Yu
👻 Liam Lanigan
Polly
2023-10-16 10:45:49

@Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-10-16 11:21:24

Also @channel this is the moment to add the topics YOU would like to discuss in the "Rota of topics" document (pinned on this channel). I'll pick a few from there!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-10-20 17:42:59

Hello @channel the people have spoken, we’ll have our first #spaamtisch meeting in the “regular’s table” format on the 26th of October 2023 at 4-5pm CET!

Please choose in the poll below the topics you’ll like to discuss!

Cheers!

Polly
2023-10-20 17:47:12

@Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-10-24 13:16:39

Dear @channel the people have spoken. Our first #spaamtisch meeting “regular’s table” format will be on the 26th of October 4-5pm CET. The discussed topics chose by you will be:

-Kmer matching vs mapping methods -databases

Additionally the organisers would like to take some time to talk about the future of spaamtisch. In particular we need help in finding volunteers for the seminar sessions who want to present their work. So we’ll talk about proposed strategies to find people 🙂

Many thanks! The spaamtisch organisers

Zoom link will be shared in the next few days.

👍 Nikolay Oskolkov
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-10-24 13:20:49

Ah! Don’t forget to wear your witch/warlock hats!!! ’Tis the season!!💀👻👹

🎃 Aleksandra Laura Pach
:male_zombie: Wenqin Yu, Biancamaria Bonucci
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-10-25 14:05:05

Dear @channel, find below the link for tomorrow's #spaamtisch meeting! Biancamaria Bonucci is inviting you to a scheduled Zoom meeting.

Topic: SPAAMtisch Time: Oct 26, 2023 04:00 PM Amsterdam, Berlin, Rome, Stockholm, Vienna

Join Zoom Meeting https://ut-ee.zoom.us/j/95645964400?pwd=ckZqRXNiSTYySEFGazhDOE85d3p3UT09

Meeting ID: 956 4596 4400 Passcode: 278708

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-10-26 16:01:53

@channel we are on zoom 🔥

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-11-02 12:26:40

Dear @channel our next #spaamtisch meeting will be in the seminar format. @Jonas Niemann from the GLOBE will present his amazing work on “Parasite detection in ancient and modern metagenomic datasets”. Don’t miss this talk if you are curious about this challenging task!

Please express your day of preference in the poll below 🙂 Cheers, The spaamtisch organisers.

🙌 Aleksandra Laura Pach, Camila Duitama
Polly
2023-11-02 12:29:00

@Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-11-06 16:11:34

Dear @channel 🎙️ It is decided our next #spaamtisch meeting will be held on the 13th of November 4-5pm CET.

@Jonas Niemann from the GLOBE Institute in Copenhagen will present his amazing work “Parasites Lost: Parasite Detection in Ancient and Modern Metagenomic Datasets”. Don’t miss this talk if you are interested in knowing more about this groundbreaking research exploring the intricate relationship between hosts and their parasites!

♦️The meeting won’t be recorded as it contains unpublished work. Hence, you are encouraged to follow this seminar!

Cheers, The spaamtisch organisers.

ps Link to be shared at later stage

:partyparrot: Aleksandra Laura Pach, Nasreen Broomand, Biancamaria Bonucci, Wenqin Yu, Ele
🪱 Liam Lanigan, Jasmin Frangenberg, Freya Steinhagen, Biancamaria Bonucci, Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-11-13 14:37:22

Dear @channel the zoom link for today #spaamtisch at 4pm CET

https://ut-ee.zoom.us/j/95645964400?pwd=ckZqRXNiSTYySEFGazhDOE85d3p3UT09

❤️ Ele, Miriam Bravo, Biancamaria Bonucci, Nelli-Johanna
:catjam: Anna White, Camila Duitama, Biancamaria Bonucci, Wenqin Yu
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-11-13 15:58:43

We are online @channel! 👆

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-11-17 13:35:09

Dear @channel here you can find the form to sign up for presenting at #spaamtisch !!

We would like to point out that we are offering to host more types of presentation. In the form, you will be asked what kind of presentation you would like to give, such as:

• Regular seminar ( to present your newest paper, published or on biorxiv) • Work-in-progress seminar (to present your data, in order to get feedbacks and help with things you are stuck on) • Journal Club (discussion of a paper of your choice) Don’t be shy 🥳 🥳

https://docs.google.com/forms/d/e/1FAIpQLSc0Lb3kKm2sRTutY9Nyk58SN9Lg82VfUMtVvrEmVGmwHZxw/viewform?usp=sf_link

Cheers, The spaamtisch organisers

👍 Nikolay Oskolkov, Jasmin Frangenberg, Wenqin Yu
:spaamtisch: Maria Lopopolo, Zoé Pochon, Liam Lanigan
:meow_party: Zoé Pochon
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-11-30 17:54:10

Dear @channel

We are delighted to let you know that for our meeting before the season holidays, Santa is bringing us @Nikolay Oskolkov who will be presenting the work on the aMeta pipeline. It will be the perfect meeting for those of you who are interested in pathogen discovery.

Please reply to the poll I will post just below to express your preferred date ✨ Cheers, The spaamtisch organisers

🎉 Freya Steinhagen, Andrea quagliariello, Nikolay Oskolkov, Biancamaria Bonucci, Camila Duitama, Aleksandra Laura Pach
Polly
2023-11-30 17:57:33

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-08 17:31:49

Hello, @channel save the date for our last #spaamtisch meeting of 2023 on the 15th of December 4-5pm CET !

For all the pathogens and pipelines aficionados, we’ll close this year’s seminar series with @Nikolay Oskolkov who will be presenting the aMeta paper!

Also, I remind all of you that you can sign yourself up https://docs.google.com/forms/d/e/1FAIpQLSc0Lb3kKm2sRTutY_9Nyk58SN9Lg82VfUMtVvrEm_VGmwHZxw/viewform?usp=sf_link and present a work you have recently published, a paper you want to discuss, or a work in progress you need feedback on.

We are looking forward to seeing you soon! Happy weekend, The spaamtisch organisers.

:meow_party: Nikolay Oskolkov, Biancamaria Bonucci, Aleksandra Laura Pach, Jasmin Frangenberg
Nikolay Oskolkov (nikolay.oskolkov@scilifelab.se)
2023-12-13 19:18:49

*Thread Reply:* @Maria Lopopolo apologies for the lack of experience, how can I join the meeting on the 15th of December at 4 pm? What zoom-link and what are the rules?

Nikolay Oskolkov (nikolay.oskolkov@scilifelab.se)
2023-12-13 20:00:57

*Thread Reply:* Also @Maria Lopopolo, I got a request from somebody outside of SPAAM community if they are allowed to join the meeting. Would this be possible? If so, may I share the zoom-link with this person?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-13 20:23:50

*Thread Reply:* Of course!

👍 Nikolay Oskolkov
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-13 20:25:00
Nikolay Oskolkov (nikolay.oskolkov@scilifelab.se)
2023-12-13 22:07:35

*Thread Reply:* Thanks a lot Maria! 🙏 How much time do I have for presentation and questions?

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-14 08:14:43

*Thread Reply:* ~40 min presentation and then ~20 for the questions ;)

👍 Nikolay Oskolkov
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-15 12:46:48

*Thread Reply:* Hey @Nikolay Oskolkov I think the zoom link I provided is not working but @Biancamaria Bonucci will share a functional one soon

👍 Nikolay Oskolkov
Nikolay Oskolkov (nikolay.oskolkov@scilifelab.se)
2023-12-15 12:53:21

*Thread Reply:* good, thank you Maria!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2023-12-15 13:05:56

Hei @channel, here is the zoom link for today #spaamtisch at 4pm CET:

https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

👍 Jasmin Frangenberg, Nikolay Oskolkov
Zoé Pochon (zoe.pochon@gmail.com)
2023-12-15 15:47:51

I normally would have joined as it is about aMeta, but I’m in a train through Denmark-Germany and the data availability is just too shaky! Anyway, enjoy! 😊

👍 Nikolay Oskolkov, Biancamaria Bonucci
🙌 Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2023-12-15 16:02:07

Hi @channel we are connected!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-01-12 12:00:41

Dear @channel happy new year! I hope everyone had a nice season holiday and now you all come back with renewed energy for a year of #spaamtisch. Don’t forget that we have a form where you can sign up to volunteer to give a seminar in three different formats: • Regular seminar (where you present a recently published work) • Work in Progress (where you present something you are working on and you need feedback on from the community) • Journal Club (you choose a paper that you are interested in exploring with the community) https://docs.google.com/forms/d/e/1FAIpQLSc0Lb3kKm2sRTutY_9Nyk58SN9Lg82VfUMtVvrEm_VGmwHZxw/viewform?usp=sf_link

Soon, I will send out a poll to have our come back regulars’ table meeting. Don’t forget to add a topic you would like to discuss in our rota of topics document. https://docs.google.com/document/d/1YMcDb5sJMAZeThgKkNea7X5V7pa1eaQx/edit?usp=sharing&ouid=118094628411852884592&rtpof=true&sd=true

Cheers, The spaamtisch organisers

Polly
2024-01-12 12:05:32

@Maria Lopopolo has a polly for you!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-01-18 10:02:56

Dear @channel, save the date for our first #spaamtisch meeting of 2024 in the "regular's table" format on the 25th of January 4-5pm CET !:partyparrot:

Polly
2024-01-18 10:03:17

@Biancamaria Bonucci has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-01-24 14:06:20

Dear @channel it is decided, tomorrow 25th of January 4-5pm CET we will be discussing:

-statistical tests and hypothesis validation -databases (if we have time)

Moreover, I’d like to try something new given the success of @Nikolay Oskolkov seminar and the fruitful discussions we had after his talk, I propose we write down our questions for Nikolay specific to aMeta on this document https://docs.google.com/document/d/1ohIFiLntOpJSb3n4piqaY2YMbz0Bu-i4Hm7vEz_kiSk/edit?usp=sharing so that he may further answer your doubts. Perhaps a blog post could come out of this for future reference 🙂 (@Shreya). If this helps perhaps we can do this also for other seminars.

Cheers, The spaamtisch organisers

:spaamtisch: Wenqin Yu, Jasmin Frangenberg, Alina Hiss, Biancamaria Bonucci, Aleksandra Laura Pach, Camila Duitama
👍 Nikolay Oskolkov, Zoé Pochon
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-01-25 09:19:56

Biancamaria Bonucci is inviting you to a scheduled Zoom meeting.

Topic: #SPAAMtisch Time: This is a recurring meeting Meet anytime

Join Zoom Meeting https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

Meeting ID: 935 7705 2785 Passcode: spaam

👍 Nikolay Oskolkov
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-01-25 09:20:22

Hei @channel, Here the link for today's #spaamtisch ☺️

👍 Nikolay Oskolkov, Jasmin Frangenberg
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-01-25 15:59:48

We are online @channel! 👆

Nikolay Oskolkov (nikolay.oskolkov@scilifelab.se)
2024-02-01 12:12:19

@channel I did my best to answer the aMeta questions via google docs, please see the link above posted by @Maria Lopopolo. I tried to put as much details as possible, but please let me know if I missed / misunderstood something. And please keep adding your questions to the google-docs above, thanks @Maria Lopopolo for this nice format, hope it will be useful for everyone!

Just in case, here is the link; https://docs.google.com/document/d/1ohIFiLntOpJSb3n4piqaY2YMbz0Bu-i4Hm7vEz_kiSk/edit?usp=sharing

❤️ Gabriel Yaxal Ponce Soto, Maria Lopopolo, Camila Duitama
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-01 12:21:35

*Thread Reply:* @Nikolay Oskolkov thank you so much for taking the time in answering so thoroughly our questions! I am inspired now and will do a similar document for other seminars to come 🙂 hoping that we may all learn from each other! People interested in making a blog issue please feel free to access this document for material if you think it will be useful 🙂 @Ele @Shreya

🙏 Nikolay Oskolkov
Shreya (shreya23@uchicago.edu)
2024-02-01 13:14:05

*Thread Reply:* There is a blog post in progress :)

🙏 Nikolay Oskolkov
✨ Maria Lopopolo
Zoé Pochon (zoe.pochon@gmail.com)
2024-02-01 15:12:51

*Thread Reply:* I have completed some of the answers with my experience, hope it is okay 😊

👍 Nikolay Oskolkov
:spaamtisch: Maria Lopopolo
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-05 15:35:25

Dear @channel February is here and I am very pleased to tell you that this month our @irinavelsko will present her Biorxiv preprint on dental calculus from the Pacific!

I will post a poll right below to choose dates for the meeting this month 🙂 We will also record the meeting and prepare a similar Google doc for continued questions from the seminar. Cheers!

🎉 Biancamaria Bonucci, Nikolay Oskolkov, Jasmin Frangenberg, Miriam Bravo
Polly
2024-02-05 15:39:58

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-08 17:16:35

Hey all, so it seems for now the winning days are the 13th and the 15th both 4-5pm with same proportions. I don’t think tomorrow is gonna be the case. I’ll give you some more time to vote 😉 👆I’ll close this on Friday. Cheers!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-12 17:32:56

Dear @channel we have a date for our next #spaamtisch meeting in the seminar format. @irinavelsko will present the newest work on dental calculus from the Pacific this week 15th of Feb 4-5pm CET. The link will be shared soon.

Looking forward to seeing you all! Cheers!

🔥 Biancamaria Bonucci, Piotr Rozwalak, Jasmin Frangenberg, Miriam Bravo, Rikai Sawafuji, Erin E Barnett, Florencia Alvarez Gallego
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-02-14 14:46:47

Dear @channel here's the invitation for tomorrow's #spaamtisch We will meet from 4 to 5pm CET 🔥 See you all tomorrow :bacteria:

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-02-14 14:47:09

Topic: #SPAAMtisch

Join Zoom Meeting https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

Meeting ID: 935 7705 2785 Passcode: spaam

:spaamtisch: Jasmin Frangenberg, Ania TSL
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-15 15:37:54

hello @channel don’t forget our seminar in 20 min! 👆

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-02-21 15:27:04

Dear @channel please find below:

• The link to our latest #spaamtisch seminar recording on our you tube channel https://youtu.be/AAh7auyWsG4 • The link to a google doc where you can write standing questions you may still have for @irinavelsko https://docs.google.com/document/d/1bPl07_YMkb3g56guxZxk0mM89LXONK8gFh0wLi1MCzE/edit Thank you all for participating and of course to the speakers.

Also please don’t forget to please sign-up if you want to give a #spaamtisch seminar, journal club or brainstorm and issue you are facing together. https://docs.google.com/forms/d/e/1FAIpQLSc0Lb3kKm2sRTutY_9Nyk58SN9Lg82VfUMtVvrEm_VGmwHZxw/viewform?usp=sf_link

I remind you all that this is a safe space for everyone 🙂 and we try our best to moderate the meeting so that priority is given to students and young researchers to ask questions and share common issues and opinions. Nevertheless, senior researchers and PIs are invited to participate and share their knowledge on topics they are more expert on. So this is a great opportunity for learning too! Cheers!

YouTube
} SPAAM Community (https://www.youtube.com/@spaam-community)
:spaamtisch: Wenqin Yu, irinavelsko, Rikai Sawafuji, Jasmin Frangenberg, Liam Lanigan, Camila Duitama
👏 Ele, Barbara, Anastasia Brativnyk, Jasmin Frangenberg, Camila Duitama, Florencia Alvarez Gallego
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-03-01 16:48:04

Dear @channel I am pleased to announce that @Giulia Zampirolo from GLOBE Institute will present her work on “Early Pastoralism in Central European Forests: Insights from Ancient Environmental Genomics” for our next #spaamtisch meeting.

Please vote your preferred date in the poll I will post below! Cheers, The spaamtisch organisers

Polly
2024-03-01 16:50:28

This polly is closed. @Maria Lopopolo has a polly for you!

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-03-08 16:11:51

@channel I will keep the above poll👆 open for another few days. So please don’t forget to vote for the next seminar with @Giulia

Also don’t forget that we have a google doc if you want to ask questions on @irinavelsko research https://docs.google.com/document/d/1bPl07_YMkb3g56guxZxk0mM89LXONK8gFh0wLi1MCzE/edit#heading=h.efjhkg4kvhb3 AND here is the google doc with @Nikolay Oskolkov replies to the questions you all had https://docs.google.com/document/d/1ohIFiLntOpJSb3n4piqaY2YMbz0Bu-i4Hm7vEz_kiSk/edit#heading=h.kwenvwbo6nfj

Have a nice weekend! The spaamtisch organisers

🙏 Nikolay Oskolkov, Elisa Davis
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-03-13 14:18:13

Dear @channel we have a date for our next #spaamtisch meeting, which will be in the seminar format!!

@Giulia Zampirolo from GLOBE Institute will present her work on “Early Pastoralism in Central European Forests: Insights from Ancient Environmental Genomics” on the 28th of March 4-5 pm CET !

The zoom link will be shared soon!! Looking forward to seeing you all!

Cheers, The spaamtisch organisers

👀 Anna Chagas, Elisa Davis, Ania TSL
:spaamtisch: Jasmin Frangenberg, Wenqin Yu
✨ Maria Lopopolo, Anastasia Brativnyk
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-03-27 13:09:59

Dear @channel here's the invitation for tomorrow's #spaamtisch We will meet from 4 to 5pm CET 🔥 See you all tomorrow :bacteria:

Topic: #SPAAMtisch

Join Zoom Meeting https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

Meeting ID: 935 7705 2785 Passcode: spaam

Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-03-28 15:53:16

Hello @channel join us soon to hear about eDNA with @Giulia!

Freya Steinhagen (stu227847@mail.uni-kiel.de)
2024-03-28 17:12:56

Thank you for today, it really was super interesting 🐑 🐂 🐐 🐖 🏞️

Giulia (giulia.zampirolo@sund.ku.dk)
2024-03-28 17:21:54

Thank you for the interesting points raised with all your questions! 😊 and I wish you a Happy Easter! 🐣

👍 Nikolay Oskolkov, Biancamaria Bonucci
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-04-24 21:20:52

Dear @channel SAVE THE DATE on your calendars!! 📅📅

On the 6th of May , from 2:30 CEST (in order to try to have more people from different time zones), we will have our next #spaamtisch!! It is gonna last approximately 2 hours! Interested in Improving and standardising metadata reporting ?? This is the date to attend #spaamtisch !

This time in fact, @Meriam Guellil and @James Fellows Yates are going to speak about MInAS, but in particular, this is gonna be a testing and feedback session so all of us is needed! If you want to know more about MInAS you can go here to see the website!

The Zoom Link is going to be shared closer to the date! Hope to see many of you there!

Cheers, The spaamtisch organisers

❤️ Laura Carrillo Olivas, Nikolay Oskolkov, Wenqin Yu, Ania TSL
:partyparrot: Maria Lopopolo, Jasmin Frangenberg, Ania TSL
Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-05-02 10:26:01

Dear @channel Below a description of what to expect from our next #spaamtisch!!

Gathering metadata or finding samples/data based on metadata for a project can be a real challenge, but so can uploading metadata! Anyone who has ever uploaded sequencing data to public repositories or aggregated data for a project knows what a nightmare it can be! The MInAS project aims to develop standardised metadata reporting schemes of ancient DNA samples and sequencing data via community-based consensus and training. But in order to develop these schemes we need as much community input as possible. We are a diverse research community and you will be the end-user.

In this SPAAMTisch we want to get YOUR perspectives and contributions to making a field-wide reporting standard! During the SPAAMTisch we will introduce the project and ask you to try filling out the draft MInAS metadata checklist we have been developing. This is your chance to provide input, contribute and make sure the standards also fit YOUR research!

⁉️ What we need from you: Join us on May 6th 2024 and please bring information about two of your samples (published or unpublished).

👀 What you can get: Everyone who contributes feedback during the workshop will be eligible for coauthorship on future publications.

We hope to see many of you on May 6th at 14:30 CEST!

Cheers, The SPAAMTisch organisers and the MInAS Team

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-05-02 10:27:16

Here's the invitation link See you all on Monday!! 🔥

Topic: #SPAAMtisch

Join Zoom Meeting https://ut-ee.zoom.us/j/93577052785?pwd=ekxNM2s5NFkzMjhsNUxYa2c2cFFQUT09

Meeting ID: 935 7705 2785 Passcode: spaam

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-05-06 13:24:01

Dear @channel reminder for our spaamtisch! We are going to start in one hour! :partyparrot:

} biancamaria bonucci (https://spaam-community.slack.com/team/U03EP777J9H)
Maria Lopopolo (maria.lopopolo1989@gmail.com)
2024-05-06 14:31:18

@channel we are live NOW! please join our MinAs interactive workshop today!

Biancamaria Bonucci (biancamaria.bonucci@ut.ee)
2024-05-06 17:26:01

Thanks to our speakers @James Fellows Yates and @Meriam Guellil for the interactive workshop and to everyone who joined for their contribution!!:smilingfacewith3hearts:

:meow_party: Zoé Pochon, James Fellows Yates, Sterling Wright, Wenqin Yu, Jasmin Frangenberg, Marica Baldoni
🙏:skin_tone_2: Meriam Guellil
James Fellows Yates (james_fellows_yates@eva.mpg.de)
2024-05-06 17:48:46

Thank you very much everyone who attended! It was very helpful feedback ❤️❤️❤️

♥️ Biancamaria Bonucci, Zoé Pochon, Sterling Wright, Wenqin Yu, Piotr Rozwalak, Jasmin Frangenberg, Marica Baldoni
:spaamtisch: Maria Lopopolo, Biancamaria Bonucci